Matt Cieslak

Thanks!! I have a copy locally and am writing CI tests with it so we don't run into this again

One question - do you know if all the symlinks from freesurfer made it to openneuro? I'm seeing a lh.pial.T1, lh.pial.T2 but no lh.pial symlink pointing to lh.pial.T1. Does this...

#784 should have fixed this issue. When you get a chance @araikes could you try out pennbbl/qsiprep:unstable on your data? Please reopen if you find a new problem

could you post the content of pipeline.json?

Hi @keithgjones, you won't be able to run that pipeline as-is without anatomical data. The transform from the anatomical data to template space is used to get atlases aligned to...

I just ran into this one too, thanks for opening the issue

Does anyone on this thread know of a good open dataset that has dwi and freesurfer results? The reason this exists as a bug now is that I don't have...

this is perfect! Do you mind if I use this in the CI tests?

You're allowed to host the data on openneuro even with point 3 `I will not distribute this dataset or its components to any other individual or entity`?

This should definitely be fixed in 0.22.0, will reopen if it reappears