Nico Matentzoglu
Nico Matentzoglu
> FYI there were some major updates motivated by Jakob Voß's comments, the SeMRA I/O for SSSOM is now supporting reading all of SSSOM and outputting a valid subset of...
The need to do build a more comprehensive model for confidence is rising with @cthoyt request #438 Mapping confidence has, the way I currently think of it, the following layers...
Hello @Superraptor, good to hear from you! This is one of the more annoying things to document in a model which reflects various different representations. The pipe | character is...
@jseager7 This is a great question. Since Fission Yeast is already in uPheno, it is fair to say that while "uberon" is metazoan, uPheno is probably better conceptualised as "scope-less"....
> Before consolidating fungal or plant anatomical entity phenotypes with those of animals using the 'abnormal anatomical entity' uPheno patterns, I would strongly suggest establishing distinct ontological branches specifically for...
> I think the remaining issue is to integrate [fungal structure](https://www.ebi.ac.uk/ols4/ontologies/fao/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FFAO_0000001?lang=en) with Uberon ['anatomical entity'](https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0001062?lang=en) somehow. @jseager7 do you have any relationship to FAO devs? Could you make an issue...
I can help with the release if someone tags me
@stevevanhooser I reached out to you on slack to continue the discussion there!
> @matentzn continuing the discussion on Slack? Bear in mind we'll lose all record of it. I personally think it is a bad idea, but if you (a) let everyone...
**I agree with the proposed design** - I am just a bit unsure why there is no way to configure the LinkML schema to in a way that allows us...