Nico Matentzoglu

Ontologies are formal representations of knowledge within a specific domain, expressed as a set of concepts and their relationships. They provide a shared vocabulary and structure for describing and organizing...

I would absolutely recommend against this. The ontology owners should supply the version of the ontology that they want the world to see, and there should be no reasoning, ubergraph...

> DL-style queries over the OLS ontologies You can ask @dosumis who has been using https://owlery.docs.apiary.io/ in production in VFB pipeline - which may be one way, but not sure...

That is a pretty cool idea

I dont think this is a bad idea! You can look at robot export as a good blueprint for this sort of thing: https://robot.obolibrary.org/export Another option is https://github.com/biolink/kgx which has...

Bigger is good but why not curiefy as well?

@LeaSeep thank you for the report, I have nothing to do with CLO but this seems like a pretty serious thing so I went ahead and fixed the source metadata:...

OLS pulls from the OBO foundry metadata, so it should automatically be picked up soon, cc @jamesamcl

Related: https://github.com/GenEpiO/genepio/issues/21

I have nothing to do with the CLO team, but this error is not an error, it is a mislabelled warning. Other than that misleading output, does the process create...