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unable to convert owl format to obo

Open lmanchon opened this issue 3 years ago • 3 comments

the conversion from owl to obo failed:

java -Xmx4g -jar ./robot.jar convert -i clo.owl -f obo -c false --output clo.obo

ERROR Input ontology contains 1 triple(s) that could not be parsed:

thank you --

lmanchon avatar May 12 '22 08:05 lmanchon

I have nothing to do with the CLO team, but this error is not an error, it is a mislabelled warning. Other than that misleading output, does the process create an obo file? Mind, with check false, your obo file won't be readable for many obo format readers..

matentzn avatar May 12 '22 08:05 matentzn

the obo file is created but only when I use the parameter -c false. Is there a website with ontologies in obo format ?

lmanchon avatar May 12 '22 08:05 lmanchon

I answered in detail on your ROBOt issue.

matentzn avatar May 12 '22 08:05 matentzn