Martin Rippin

`--exclude` flag could use better documentation

3

Hey, I was a bit confused on how the `--exclude` flag works. I tried different approaches like defining it multiple times or separating the different regexes with spaces but nothing...

DB download fails with "ERROR: Download didn't fully complete!"

1

Hey, I am using MLST in a pipeline and the lab wants to update the database each time we are running the pipeline on a new batch of samples. Until...

Flag --use-singularity

7

Hey, I first want to say that I really appreciate that you put these actions together - it makes things so much easier to have workflows continuously linted and tested....

add dragen module - v2

7

## PR checklist Closes #4026 - [ ] This comment contains a description of changes (with reason). - [ ] If you've fixed a bug or added code that should...

I am trying to run `som.py` on two vcfs using `-R`/`-T`option to focus only on certain regions. I got: ```bash 2024-12-02 13:37:32,097 WARNING No reference file found at default locations....

Hey guys! I am working on adding a new module to `nf-core` and tried to create a snap file with `nf-test`. However, I ran into some problems. I have some...