Mara Lampert

Results 8 issues of Mara Lampert

Currently, before computing the `feature_correlation_matrix` all rows with NaN values are removed (see [documentation](https://github.com/haesleinhuepf/napari-accelerated-pixel-and-object-classification#feature-correlation-matrix) and code) https://github.com/haesleinhuepf/napari-accelerated-pixel-and-object-classification/blob/68da4c98e34a5a5a41e401affd3c41f03d5e6a33/napari_accelerated_pixel_and_object_classification/_custom_table_row_classifier.py#L264 However, in my case I had the measurement `moments_normalized` in my table. This...

When using `seeded_watershed_labeling`, there are artefacts at the label borders (in this example visible in blue): Best, Mara

Hi @haesleinhuepf, This PR solves Issue #76. I updated some outdated parts of the documentation. Let me know if something else should be changed. Best, Mara

I think there this part of the documentation is outdated: > Last but not least, make sure that in case of time-lapse data the label image has labels that are...

Hi @quantumjot, Very cool plugin! Would it be possible to provide some written documentation (Installation instructions, Input file format, How to use the plugin, common problems that have been encountered),...

documentation

Hi all, I was trying to make a prediction with `Custom Model 2D/3D` and I was getting the following out of memory error in the terminal: ``` Hint: If you...

bug

It would be cool to visualise centroid measurements directly in the image (for example the ones from napari-skimage-regionprops). One idea as discussed in our meeting would be by using a...

Hi @haesleinhuepf, As discussed here the normalization notebook. Therefore, this PR contains: - added `stackview` as installation requirement in readme file of subsection image_analysis_basics - normalization notebook If you feel...