Mara Lampert
Mara Lampert
Currently, before computing the `feature_correlation_matrix` all rows with NaN values are removed (see [documentation](https://github.com/haesleinhuepf/napari-accelerated-pixel-and-object-classification#feature-correlation-matrix) and code) https://github.com/haesleinhuepf/napari-accelerated-pixel-and-object-classification/blob/68da4c98e34a5a5a41e401affd3c41f03d5e6a33/napari_accelerated_pixel_and_object_classification/_custom_table_row_classifier.py#L264 However, in my case I had the measurement `moments_normalized` in my table. This...
When using `seeded_watershed_labeling`, there are artefacts at the label borders (in this example visible in blue): Best, Mara
Hi @haesleinhuepf, This PR solves Issue #76. I updated some outdated parts of the documentation. Let me know if something else should be changed. Best, Mara
I think there this part of the documentation is outdated: > Last but not least, make sure that in case of time-lapse data the label image has labels that are...
Hi @quantumjot, Very cool plugin! Would it be possible to provide some written documentation (Installation instructions, Input file format, How to use the plugin, common problems that have been encountered),...
Hi all, I was trying to make a prediction with `Custom Model 2D/3D` and I was getting the following out of memory error in the terminal: ``` Hint: If you...
It would be cool to visualise centroid measurements directly in the image (for example the ones from napari-skimage-regionprops). One idea as discussed in our meeting would be by using a...
Hi @haesleinhuepf, As discussed here the normalization notebook. Therefore, this PR contains: - added `stackview` as installation requirement in readme file of subsection image_analysis_basics - normalization notebook If you feel...