David Manthey

We have some better samples now on slicer_cli_web (e.g., https://github.com/girder/slicer_cli_web/tree/master/example-average-color).

Specifically, once you have pip installed HistomicsTK, it would be nice to be able to run the clis via something like `histomicstk PositivePixelCount `

With scikit-image 0.19, the code with "weighted_centroid" is still allowed. With this change, we need some code to handle either case (so the library still works as long as we...

> @manthey do you ever plan on switching from CircleCI to GitHub actions? Alternatively, is there funding for CI? macOS on circleCI requires a paid plan @sumanthratna I have no...

Thanks. I'll see if I can narrow down the exact necessary version of numpy and just require that when on OSX.

The tile sources have complex library dependencies. You can either install those libraries via our python wheels by adding `--find-links https://girder.github.io/large_image_wheels` to the pip install command, install fewer tile sources...

Since you are building from source, you need to install the `python-dev` package (in ubuntu -- it is probably named `python-devel` in CentOS).

As the error says, you need to install libtiff. As described in the README, you can do this with a python wheel that we publish (e.g., `pip install --find-links https://girder.github.io/large_image_wheels...

If you didn't use the wheels to install it initially, then pip will use the cached version and not the wheels. You'll need to tell pip to reinstall it without...

I think this is some sort of compatibility issue with the version of numpy and Cython on your Windows machine. Specifically, what versions of Python, numpy, and Cython do you...