lvsltz

explicit icephys gain docs (stimulus)

1

To complete NeurodataWithoutBorders/pynwb#1128, explicit gain docs should be added to `CurrentClampStimulusSeries` and `VoltageClampStimulusSeries`as well. So the units should be: `CurrentClampStimulusSeries` : Volt/Ampere `VoltageClampStimulusSeries` : Volt/Volt I would also update the...

Possible duplicate of slice information in IntracellularElectrode and NWBFile

2

The docs of these two Datasets read, respectively, > Information about slice used for recording. and >Description of slices, including information about preparation thickness, orientation, temperature, and bath solution. They...

convenience functions for icephys in schema 2.4

6

Is there any plan to include in matnwb some convenience functions for the new icephys tables introduced by nwb-schema 2.4, such as those mentioned in the [pynwb tutorial](https://pynwb.readthedocs.io/en/stable/tutorials/domain/plot_icephys_pandas.html#converting-icephys-metadata-tables-to-pandas-dataframes) (e.g. `get_icephys_meta_parent_table`...

NWBDataInterface object in scratch

2

I am using an [extension](https://github.com/lvsltz/ndx-bbp-icephys-hierarchy) to add groups of groups under `/scratch` to replicate the hierarchy of the [icephys extension](https://github.com/oruebel/ndx-icephys-meta). The [base container](https://github.com/lvsltz/ndx-bbp-icephys-hierarchy/blob/1c6054faef4a63ed59a288e774e47c50bfbabdee/src/spec/create_extension_spec.py#L78-L87) inherits from `NWBDataInterface`, yet MatNWB (but not...

Update icephys accordions with AlignedDynamicTable and renamings

4

There have been some major changes since February in `ndx-icephys-meta` and this PR syncs `nwb-jupyter-widges` with that extension: - some tables have been renamed - `IntracellularRecordingsTable` is now an `AlignedDynamicTable`

Full filtering on icephys hierarchical tables

4

**Introduction** This is just an idea on how to visualize the icephys data when hierarchical tables [from ndx-icephys-meta](https://github.com/oruebel/ndx-icephys-meta) are present. This will: - probably cover all queries listed in [this...

At the moment, within a single file, the widget merges together the repetitions of different cells, apparently in the following order: `[rep1 cell1], [rep1, cell2], [rep2, cell1], [rep2, cell2]` etc...

Fixes #142 (I only tested the HTML code)

Please note that the tooltip information for the Brush Size is not formatted correctly (screenshot below). It looks like the line causing this issue is [here](https://github.com/pyushkevich/itksnap/blob/f38725745290fe73c32982204d0a43514bf6297c/GUI/Qt/Components/PaintbrushToolPanel.ui#L209C64-L209C71). ...

#112 introduced dragging and dropping of label files (amazing, thank you !) but ITK Snap crashes and closes if incompatible text files are loaded (or files with wrong line endings)....