luckysardar

Computematrix input wig file

4

I am new to deeptools and chipseq data analysis , Wanted to plot density TSS and genebody using computematrix and plotprofile, the wig file which is needed for compute matrix...

Hello, Thanks for the tool I have used macs for non allelic data there we will have the one input and one sample as treated, Currently I have allelic bam...

SNP level counting showing bi and mono allele count for same gene

1

Hello Felix SNPsplit is a great tool its helping me a lot in my analysis. To validate the output file I got snp level count from ASE readcounter for each...

Hello, currently working on single cell analysis, in my objective we have to do the SCALE anlysis which is a great tool with profer explanation, I have dataset without a...

Allelic analysis HiC-Pro G2 genome not mapping

4

Dear I am trying to do allelic analysis Hic data getting same error G2 is mapping reads are zero and iced normalisation step getting error. I used bellow command to...