Lucian Smith

Looking at the code, I think 'writeMathMLToStdString' will also leak, too. But that could be fixed in libsbml; the other leak is probably an issue with SWIG? EDIT: nope, no...

Can we change libsbml's *setter* so it doesn't write numbers smaller/larger than double min/max? I can use Antimony to create SBML models with e-314 numbers, and NEWT also did the...

Sure, I'll put this on my to-do list. I think I would set sub-min values to min instead of 0, just on the theory that if the user wanted zero,...

I did find those functions eventually, but they use some sort of non-standard infix, presumably that matches a somewhat common way of writing them. They also use plus and times...

Agreed! Though, uh, if this case isn't in the SBML Test Suite it probably should be ;-)

We used to have a facility to select subsets of tests based on the tags, but with the loss of the Caltech servers, I think it might not be around...

@baconcheese113 : We put this together a few years back, but if it helps: https://github.com/sys-bio/libsbmljs We'll be updating it to the latest version of libsbml soon; we need it for...

See https://github.com/sbmlteam/libsbml/commit/b22583ea59f4c5f216d09d3064e1e6db61b27a2a for an attempt to fix this. Mostly I'm not entirely sure what situation causes the errors to show up in the log like that, when they need to...

Hmm, maybe it would be worth it to re-write the SED-ML generator in Python. It might be more maintainable going forward, with a more diverse group of contributors?

Latest updates comparing VCell 7.5 to 7.6: [vcell_compare.csv](https://github.com/user-attachments/files/17104827/vcell_compare.csv)