Luan Nguyen
Luan Nguyen
@BiocondaBot please add label
See commits: - [f17c17c](https://github.com/nf-core/oncoanalyser/commit/f17c17c03296e988be6d53adcdd0dc23e2f1e01c): Add CRAM/CRAM_REDUX/CRAI filetypes. Internally, these are treated the same as BAM/BAM_REDUX/BAI files - [2f928e7](https://github.com/nf-core/oncoanalyser/commit/2f928e772bf8715cd643430dd77cc7fbbba35152): Update docs regarding starting from CRAM, and add warning regarding performance issues...
For visibility, the current virusbreakend db lacks the actual reference sequence of HPV33 (i.e. not the isolate sample sequences) because it was moved from the RefSeq db to the GenBank...