lshep

you can ignore this message it just means the package was accepted and changes were made after the fact that the reviewer might want to glance at. Once accepted there...

The default branch of your GitHub repository has been added to Bioconductor's git repository as branch devel. To use the git.bioconductor.org repository, we need an 'ssh' key to associate with...

I moderate packages normally once a week. Once moderated, if a package passes the pre-check, it will build/check on our system and will require a clean build/check to be assigned...

``` > invisible({ capture.output({ counts_list

You need to push to bioconductor and trigger a new build to continue. Please see [this previous message](https://github.com/Bioconductor/Contributions/issues/3442#issuecomment-2155185123)

Will this package supersede current Annotation packages JASPAR2018, JASPAR2020, JASPAR2022, and JASPAR2024 where these older packages could potentially be deprecated? I see you mention AnnotationHub as biocView? should the entries...

Will this package supersede current Annotation packages JASPAR2018, JASPAR2020, JASPAR2022, and JASPAR2024 where these older packages could potentially be deprecated? I see you mention AnnotationHub as biocView? should the entries...

So is this package going to change its name? If that is the case we should not proceed until you are ready for that to happen as it is very...

@da-bar response ?

Will it only be the links to the downloadable data that changes or the entire metadata? And will this just be a one time change or every release (not including...