Loraine Brillet-Guéguen comments

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Loraine Brillet-Guéguen

routes.rb posts to /#{job.id}; should post to REQUEST_URI/{#job.id}

> resulting in requests going through two reverse proxies (somewhat similar to the scenario described later in #464 , though with apparently two nginx reverse proxies in this case---one of...

special detail view for genes

Would be useful to be able to get the protein sequence from the (sub)features of type CDS and exon too (not only gene and mRNA).

Popup for a GFF3Tabix feature: callbacks not working in the "Attributes" section

Indeed, it is ok with lower-case attribute names in the fmt functions. Thanks! I would say it is better if attributes are handled the same way in fmt functions in...

Popup for a GFF3Tabix feature: callbacks not working in the "Attributes" section

And for the GFF3Tabix, attribute handling in fmt function is not consistent between the "Primary data" section (must have same case as in the GFF file) and the "attributes" section...

Customize display of coverage depth as XYCoverage with log scale

Another addition: it would be nice to be able to scale the coverage histograms like the XYPlot (e.g. "autoscale"="local") xref: https://sourceforge.net/p/gmod/mailman/message/36428645/

moving to QIIME v2 ?

great ! Thanks !

Progress with Docker version

Hi! I would like to know if a docker version is now available somewhere. We also would be interested in installing the pipeline on our computing infrastructure as docker or...