Laura Harris
Laura Harris
https://www.ebi.ac.uk/gwas/docs/fileheaders#_file_headers_for_ancestry_download https://github.com/EBISPOT/gwas-ui/blob/documentation/goci-interfaces/goci-ui/src/main/docs/fileheaders-content.adoc Action: update definition of “Broad ancestral category” New definition: BROAD ANCESTRAL CATEGORY: Ancestry category group label, assigned to reduce complexity within the data sets and place samples in...
AAP will no longer be supported by EBI and so we need to implement a replacement.
we have huge impact in data release if Efo's are missing , the Data release fails at Solr QC step & we have to start DR from scratch to fix...
Updates required to support aims of NASEM report on population descriptors in genomics.
Users typically do not provide ancestry specific sample numbers in submissions. A possible cause of this is the header text in the template which prompts them to separate the ancestry...
There are some mondo terms in the database that haven't been imported into EFO. There are EFO terms for these traits already, so the studies should just be updated to...
In the last DR, Mapped trait is showing blank record in the studies and associations download files for ~126K associations (16% of total) and ~15K studies (11% of total). To...
Submitters need a validator for top associations that can be run independently of the deposition app. This should be based on the slimmed down template specified in https://app.zenhub.com/workspaces/gwas-59df823c4a6feb3786810391/issues/gh/ebispot/xgwas-curator-tasks/39
Document every step of DR - what it does - where it runs - what happens to each data component - publication, study, associations, trait etc - with a view...