minimap2
minimap2 copied to clipboard
lh3
A versatile pairwise aligner for genomic and spliced nucleotide sequences
您好，我在我的read比对函数中，在一个read精确另一个read非精确时调用了您的collect_minimizers函数和collect_seed_hit函数。在该read比对函数中，我这样声明了km：void *km = my_km_init();，在调用了collect_minimizers和collect_seed_hit后，销毁的时候出现了错误。先前我没有加入断言，而是直接destory，但是在执行几十万条read后会发生段错误。在检验bug时，发现了内存泄露，请问我应该如何解决，谢谢您。销毁km代码如下： if (km) { km_stat(km, &kmst); assert(kmst.n_blocks == kmst.n_cores); // otherwise, there is a memory leak if (kmst.largest > 1U
Without `override` the extra values are not appended if the variable is provided by the user, e.g. `make CFLAGS="my custom flags"` I didn't add `override` to `OBJS` because I think...
Hi! I am testing minimap2 (69e3629) with base alignment on a hard masked reference and trying to penalize the matching of `N`s. I discovered that choosing `--score-N` values of 13...
