Heng Li
Heng Li
If you have already broken long chromosomes, I am not sure the crash was caused by the long-sequence bug in miniprot. It could be due to insufficient memory as miniprot...
@tbrown91 VGP folks were talking about not classifying retrocopies as duplicates two weeks ago. Neng added the feature and released v0.2.7. With option `--retrocopy`, compleasm reports a new class "R"...
I think strictly defining the allowed characters of each field is a good thing, if this has not been done. However, a full-blown grammar is overkilling and actually not very...
I assume this is the genome mode. If yes, compleasm writes the miniprot output somewhere. It would be good to first check the alignment of these genes.
Are these alignments generated by dipcall?
Ok, first of all, dipcall is developed for creating truth variants along with confident regions. It tries to be conservative such that calls in confident regions are of high quality....
This is something I want to improve as well. That said, quality trimming is a bad practice in my opinion.
Thanks. This is new to me. I have added a note in Getting Started. Not sure what else I can do.
@jkbonfield [provides](https://bsky.app/profile/jbonfield.bsky.social/post/3lyuhc55vks2f) an easy way to find the scam sites from this group: google "+447950904740" or "emmawatsofficial54". So many of them. I guess registrars don't care or don't know how...
I don't know. You may try tcmalloc or mimalloc.