Lev Levitsky
Lev Levitsky
Should we also change it to "mass spectrometry" in all annotations then?
From the Zoom discussion, I think we agreed that the `pooled sample` column should be required. I think if we don't require the list of samples there, we should specify...
Sounds like a good idea! As part of this process it may be worth considering steps to ensure that all annotations here (and perhaps on PX?) remain valid or get...
I agree that we should not assume DDA or anything else as default. And it makes sense to require this column.
Thank you for the response! It's good to know about the `rename_modifications` method, although an automatic mapping would definitely make things much easier. Is there a reason not to rely...
In my first example the `Modifications` column can be used as a source for the mapping. I have no experience using MaxQuant; perhaps there is a more exhaustive source for...
I tried getting the nightly file (for x86_64) and I got the same error: ``` $ sudo dpkg -i OpenMS-3.6.0-pre-nightly-2025-12-20-Debian-Linux-x86_64.deb (Reading database ... 256468 files and directories currently installed.) Preparing...
This one installs fine for me!