lbleicher

So, I've been trying different configurations for the seed file and perhaps I am not building it properly. From the example (LY86/LY96) it seems I shouldn't need to add a...

Update: it seems the issue was caused by the fact one of the aliases for HIUase is part of one of the alias for TTRs (HIUases were also known as...

Thanks, Kona, after fixing that detail it seems to be working fine with various input changes. As for defining scope, am I right in *not* including an outgroup in the...

It did! I probably missed it before because it came early in the output - perhaps it would be interesting to write the warnings as the last output text? Perhaps...

It does, but it is too long to be copied here. Let me know if the entire file is needed and I'll post it somewhere, here's its top and last...

A rerun produced a very similar output - I got a 01_initial-dataframe.csv with the same filesize, the blast result XML is almost the same size (a difference of three lines),...

Hi, is the information correct? When I tried git pull ***@***.***:harmsm/topiary.git main I get the message: ***@***.***: Permission denied (publickey). fatal: Could not read from remote repository. Please make sure...

Hey, Mike, sorry about the delay, I just had one of those crazy weeks. Here's the error I'm getting: Downloading Danio rerio proteome Downloading proteome for taxid '7955' Process Process-11:...

> Same issue in this game: https://18xx.games/game/174346 I am having the same problem with a game of SoH: https://18xx.games/game/174358 And also a game of 18Uruguay https://18xx.games/game/170573