anipose

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When I run "anipose analyze" on the anaconda prompt, the names of the videos run across the screen, but there's no analysis. Does anyone have any idea of where I...

kewe7879

Multi camera calibration

6

Hello, We are using a large experimental setup to assess the memory performance in rats. Because of its large dimensions (4 x 2.5 m) and the low ceiling of our...

Mymi-INS

Non-overlapping label names in different networks create issues during triangulation if these labels are used in the constraints. I took the union of the labels from different networks to account...

gizemozd

Hello, In a multi camera setup is it possible to have 3D tracking and undistortion across four cameras that are arranged in a box when there is loss of line...

Darth-Gabagool

Anipose analyze not analyzing videos

1

Hello! I think people have had issues with this before, but not exactly what I'm having issues with. I've tried the past ways people have dealt with a similar issue...

kewe7879

Anipose analyzes videos, but doesn't complete through anipose filter

2

When I run the command anipose analyze, the command window goes through each of the raw videos, but leaves behind a user warning stating UserWarning: `layer.apply` is deprecated and will...

kewe7879

Demo 3D labeled video doesn't look like as in example

4

Hi, I was trying to run anipose with the demo data, but the 3D labeled video I got looks kind of weird as in the screenshots attached below. Basically it's...

tzeriver

No module named 'vtkCommonCorePython'

1

I'm able to get up to the point in my project of label-3d, then receive the error "no module named vtkcommoncorepython" when I run label-3d. I've tried uninstalling everything in...

mendlen

Environmental test_3 label issue

1

Hi there! Problem: when we are running the anipose steps in the newest environment (test_3), it will perfectly do almost all steps. However, anipose will create videos with 'white' markers...

rbos9

anipose analyze -- rename_dlc_files: FileExistsError

1

Problem: at the end of anipose analyze, FileExistsError occurs (see image, highlighted); it seems like for a given camera/video file, it generates multiple .pickle output files (see screenshot, at time...

fmarbach