Kushal Kolar

Just noticed with the new v0.5 release that the `cycc` module has been moved along with all the other metrics, but none of the functions within the `cycc` module are...

controller method to center camera in a scene

16

It would be useful to have a controller method that pans the camera such that the edges of the set camera position form a bounding box for all `Geometry` objects....

example with video or image updates in subplots with pan and zoom

12

This is a more complex example that kind of combines `synced_video.py` with subplots. Each view can be panned and zoom independently. The pan & zoom can be reset. If there's...

Better error message when a non-contiguous array is passed to buffer/texture

3

I got this issue when dealing when setting data for Geometry to create a line using output from sklearn's `PCA.transform()`. It can be fixed using `np.ascontiguousarray(data)` but I'm not sure...

disable sampling filter for textures

12

Hi, not sure what's the best place to put this so feel free to transfer/redirect me. I was trying to figure out if it's possible to disable the `filter` set...

API docs not rendering

1

Seems like the API docs aren't rendering, I'm pretty sure these used to render until recently? https://caiman.readthedocs.io/en/master/core_functions.html

Fix cnmf utils get file size for tiff files created in append mode

3

# Description Tiff files created in append mode raise an IndexError when saving the memmaped motion correction movie. This is due to `cnmf.utilities.get_file_size()` returning the wrong dims. Example: ```python #...

Ideas about storage engine

2

Hi Pat, it was great to meet you a few weeks ago at the workshop! I had some ideas about the storage engine, this is just brainstorming. I don't know...

- [ ] conda install process: install mesmerize in conda env after installing caiman - [ ] Check that latest pandas works with h5py v2.10.0 - [ ] update mesmerize...

Being worked on by @EricThomson Export the following to csv using a button in the ROI manager, see PR #90 - [x] `cnmf.estimates.C - [ ] `cnmf.estimates.S` - [ ]...