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Towards v0.9, conda install, update package versions etc.

Open kushalkolar opened this issue 3 years ago • 0 comments

  • [ ] conda install process: install mesmerize in conda env after installing caiman
  • [ ] Check that latest pandas works with h5py v2.10.0
  • [ ] update mesmerize tslearn stuff to work with latest tslearn and latest sklearn
  • [ ] check that stuff works with latest matplotlib
  • [ ] latest seaborn
  • [ ] latest spyder, or remove spyder stuff
  • [x] make bokeh optional
  • [x] make nuset optional
  • [x] allow decimal values for min_snr and min_pnr in cnmfe, @EricThomson
  • [x] fix script editor HOME env var problem in Windows
  • [x] require python3.8
  • [ ] release VM with mesmerize v0.9
  • [ ] save tiff files using image=False, this flag is undocumented
  • [ ] export ROI manager stuff to csv, see #91 , contributed by @EricThomson

kushalkolar avatar Feb 14 '22 22:02 kushalkolar