Kalpana Hanthanan Arachchilage issues

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                                            Kalpana Hanthanan Arachchilage

pysam installation issue on Windows

I got a warning and an error regarding the dependency of pysam when I tried to run the atac-seq tutorial. I tried installing pysam a couple of times but keep...

bug

presence of down regulated genes in the pathway analysis with AUCell

hi, thank you for creating an awesome computational pipeline. i have a quick question regarding the usage of AUCell for pathway analysis. as far as i know, the enrichment terms...

Obtaining a cell type GRNs.

Hi thank you for creating an extensive GRN inference package. I have a quick question. I'm currently working on a project where I need to infer GRNs for each cell...

Installation issues on AWS EC2

Hi, I'm trying to install scenic+ on AWS EC2 (ubuntu 22.04). I followed the guidelines here https://scenicplus.readthedocs.io/en/latest/install.html and it installed the python v 3.11.11 and i got the error `ERROR:...