JIWEN XIN
JIWEN XIN
Hi there, When using the Ontobio python library, a "keyerror" occured. (Was testing with the code maybe 5 days ago, it's working, but it suddenly breaks today). Here's the detailed...
http://www.hgmd.cf.ac.uk/ac/index.php Seems to be **very frequently** used by a lot of labs working on variant annotation pipelines.
provide annotation based on ACMG guidlines ACMG guidelines is widely used to interpret variants. We could provide variant classification results based on ACMG guidelines. https://www.acmg.net/docs/standards_guidelines_for_the_interpretation_of_sequence_variants.pdf
https://sites.google.com/site/fireregulatoryvariation/
hgnc contains gene group info: https://www.genenames.org/data/genegroup/#!/group/567
Add CHEMBL.TARGET as a xref field for MyGene.info. { "chembl_target": "CHEMBL1223344" }
It seems the SMPDB ID (pathways) in MyGene.info is missing a couple of 0s. For example, the "codeine action pathway" has an SMPDB ID: **SMP0000405**. (see http://smpdb.ca/view/SMP0000405). But in MyGene.info,...
Is this something of interest to restructure the homolog field in MyGene.info? Current structure: ``` "homologene": { "genes": [ [ 9606, 1017 ], [ 10090, 12566 ], [ 10116, 362817...
In http://docs.biothings.io/en/latest/doc/multiple_sources_tutorial.html > Before starting to implement our hub, we first need to define a configuration file. A config_common.py The link provided here is no longer valid. Need to be...
a = {'gene': [{'id': 1017, 'source': ['clinvar']}, {'id': 1018, 'source': ['bg']}]}