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SMPDB ID (pathways) in MyGene.info is wrong

Open kevinxin90 opened this issue 5 years ago • 0 comments

It seems the SMPDB ID (pathways) in MyGene.info is missing a couple of 0s.

For example, the "codeine action pathway" has an SMPDB ID: SMP0000405. (see http://smpdb.ca/view/SMP0000405).

But in MyGene.info, the ID is SMP00405. (see http://mygene.info/v3/query?q=pathway.smpdb.id:SMP00405&fields=pathway.smpdb).

Looks like CPDB (where we get pathway info from) is having the wrong information. We need to fix it in our CPDB parser.

kevinxin90 avatar Mar 06 '19 14:03 kevinxin90