Dr. K. D. Murray
Dr. K. D. Murray
This will automatically disable bracketed paste, which seems to break bash_kernel. I have verified that this fixes the problem with the latest released version of bash_kernel. It should address issues...
## Support translation of parameters to bash/*NIX shell Thanks for papermill! I have used it for python notebooks, but a lot of my work is best done in shell, for...
HI all, [zstd](https://github.com/facebook/zstd) is a relatively new compression algorithm with incredible speed and compression ratios. I've been using zstd (via stream redirection) on fastq files extensively, with great effect (and...
Thanks for a fantastic tool! **Is your feature request related to a problem? Please describe.** I'm shooting 4k 10bit 422 these days, and using LC to trim videos to save...
Hello, In a pangenome project in A. thaliana we have adopted @ekg's [PanSN contig naming scheme](https://github.com/pangenome/PanSN-spec). Specifically, we name contigs like `${INDIVIDUAL}#${HAPLOTYPE_N}#${CONTIG_OR_CHROM}`, e.g. `at9900#1#chr1`. However, gff2gbSmallDNA.pl [line 106](https://github.com/Gaius-Augustus/Augustus/blob/master/scripts/gff2gbSmallDNA.pl#L106) removes anything...
This is how I fixed #348 locally. There may be more places where such logic is used, and would also need correction.
Hello, This is mostly a PSA, as the following took me way to long to work out myself. Perhaps the authors could add this to the docs somewhere appropriate. To...
Hi Thanks for an awesome package. We work on a series massive low-coverage WGS dataset (>100 million sites, ~1000 samples), which (from what I can tell) prevents in-memory computation on...
### Description see #1856. In short, this adds the ability to scale CPU requests to most efficiently use the CPUs of underlying nodes of a k8s cluster, of which typically...
Kubernetes will reserve a small fraction of each available node's CPU for kube-system pods that keep the cluster running. This means that (for example) on an 8 core node, 7900m...