Kai Blin

I was thinking along the lines of what is proposed in #15

Hi there, thanks for your patience. I'll look into adding support for this in the next release.

Hi, as the plasmids and the chromosomes are contained in the same assembly and thus the same file, it's not possible to exclude contents during the download. You could possibly...

Keep in mind that `ncbi-genome-download` is just a fancy frontend for the NCBI FTP server, using the assembly summary files to get all the info. If the NCBI deletes a...

Hi there. There's no function at the moment, I'm afraid. Could be a nice addition.

I don't know (or care much) about aspera, but I know that rsync supports an `--include-from` directive that I think just is a file of paths to grab. We could...

Hm, I don't think you should be running out of memory on a restricted download set like this. So much for that theory. Could you run one of your download...

The full set of complete bacteria is a big download. I've just started a download with 12 parallel server connections, and extrapolating from the speed I'm getting the `MD5SUMS` files...

Indeed I don't. I'll send you a pull request with a fix, then

ok, clearly the bioconda `nrpys` package is broken: ```bash ❯ mamba install nrpys && (pip freeze | grep nrpys || echo "missing nrpys") Looking for: ['nrpys'] conda-forge/linux-64 Using cache conda-forge/noarch...