karhohs

Why is the discrepancy between two identical time-series negative?

6

Hello, I wanted to build up some intuition about how the soft-dtw cost function works by playing around with some fake data. I started comparing scaled and shifted cosines and...

Please refer to issue https://github.com/CellProfiler/CellProfiler/issues/3397

image-key windows appear offscreen

4

The image-key window is the one that appears when you double-click a thumbnail. The top of the image-key window, or title bar, is offscreen and inaccessible. Therefore, it cannot be...

Names mixed up on "hit table" after classification

3

From a forum [post](http://forum.cellprofiler.org/t/cpa-classifier-mixes-up-names-on-classes-in-the-hit-table/3540): > Hi! > > When i use the CPA 2.2.1. fast gentle boosting classifier on my mac yosemite, i rename the positive class to Yellow, keep...

Export per object classification from a hit table to CSV

9

After training a classifier and then scoring a dataset, export a CSV file that contains per object classification data. Rows would represent classified objects and, in addition to classification info,...

CellProfiler from command line does not form image sets without complete metadata (unlike the GUI)

1

When using illumination correction images to correct a set of images, one could configure NamesAndTypes to organize image sets using metadata. Only one set of illumination correction images exists and...

the predict plugin does not run in gui

5

The predict plugin that incorporates ilastik into a module does not work when running a pipeline from the gui. There is no error displayed. Instead, the program just hangs. However,...

API documentation

5

Hi! I couldn't find documentation for the API. Does it exist? Also, the README.md states the API is similar to OpenAI Gym. Would someone please share why OpenAI Gym was...