kaede0e

Does --overwrite 0 recover RepeatModeler in progress?

12

Hello, Thanks for developing this comprehensive TE discovery pipeline. We are currently aiming to annotate multiple plant genomes with TEs de novo, which have been taking a lot more computational...

Two subspecies populations don't coalesce further back in the past

2

Hello, I am facing a very unexpected result from MSMC2 and am very confused about what happened. Any insights would be helpful! [Lingonberry_cross_coalescence_refgenome_minus.pdf](https://github.com/stschiff/msmc-tools/files/11023245/Lingonberry_cross_coalescence_refgenome_minus.pdf) Effective population size looked like this, which...