Jane

icon location Vancouver, BC icon location PhD Student in the Verchere Lab studying tissue-resident myeloid cells in humans using single cell RNA sequencing.

Results 4 comments of Jane

Problem installing velocyto.R

I would also like some help with this, have been having a similar problem.

Loom file outdated version for loompy

I’m running into this issue as well, but with Seurat v4 objects it seems.

Error with vars.to.regress: "contrasts can be applied only to factors with 2 or more levels"

I am also facing this issue with Seurat 5.1.0 ``` Regressing out Donation_Type, Enrichment Error in `contrasts model.matrix.default -> contrasts

SaveSeuratRds(): Is there a way to alter directory address of 'on-disk' matrices in Seurat object

Hi Dazcam, here's an example of where the directory address is stored in the Seurat V5 object. Here you can see an example path of 1 of 3 joined datasets...