Simon Murray comments

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                                            Simon Murray

Users want ability to maintain the order of their labels rather than default to alphabetical

Hi @liaprins-czi @colinmegill, We have a couple users who would also like to have an option such as `--disable-category-sort` which lists the categorical variables on the left hand side by...

Pulling latest version of MultiQC image on GitPod fails

Interestingly the latest version of mutliqc produces a similar but different error when pulling in GitPod: ``` gitpod /workspace/synteny (main) $ docker pull quay.io/biocontainers/multiqc:1.20--pyhdfd78af_2 1.20--pyhdfd78af_2: Pulling from biocontainers/multiqc 93e509ffbdaf: Pull...

Error in clustering step - panicked at 'no entry found for key'

Hi @wxicu, I worked with Micans on the issue when we experienced it in the summer and have since experienced it one more time. In the summer it failed because...

Error in clustering step - panicked at 'no entry found for key'

Hi @wheaton5, I have received a similar error and was wondering is you had any insight? The error output is: ``` Traceback (most recent call last): File "/opt/souporcell/souporcell_pipeline.py", line 560,...

Leidenalg not found error

This was in chapter 8: https://www.singlecellcourse.org/single-cell-rna-seq-analysis-using-seurat.html

run nf-test with awsbatch executor

I would also like to see this implemented!