Jules Jacobsen

Results 263 comments of Jules Jacobsen

For solving the module info problem on pre- and post-jigsaw Java versions, how about at least adding an Automatic-Module-Name to the MANIFEST.MF like in this PR: https://github.com/protocolbuffers/protobuf/pull/6568 It's not perfect,...

I guess you've seen this, but if not does the upcoming release of Java 15, specifically [JEP-383](https://openjdk.java.net/jeps/383) (Foreign-Memory Access API) help towards this?

are you able to access the file `/cluster/huawei-genetics/project/shiyan/Exomiser_data/2109_hg19/2109_hg19_variants.mv.db` as suggested by the error message?

Could it be a permissions issue with the user running the application? I'm not sure what the problem might be, assuming all the data is in the correct place as...

Have you supplied the `application.properties` file? It can sit next to the exomiser-web.jar on the filesystem.

UK10K and [ALFA](https://www.ncbi.nlm.nih.gov/snp/docs/gsr/alfa/) data also includes AN and AC, but not homozygous counts, so the `GnomadData` may be more generally applicable. Can then also uses these data to produce a...

Also, UKB data https://www.decode.com/ukbsummary/ whatever format that's in. UKB is now part of gnomAD v4.0 - see issue #528

This is a long comment - scroll to the conclusions section at the end if you don't want the details... Using the following as the new schema: ```proto message AlleleProperties...

Is there a chr1 in the VCF header config section? Is it missing a length?

Big single sample VCF? PED file? CohortGeneScorer?