Julianus Pfeuffer
Julianus Pfeuffer
Swath window header parsing looks incomplete. Which separators were used? What do you think @jcharkow?
This is just a warning. Does it not proceed? I though I fixed allowing arbitrary filetypes for unspecified ports in recent OpenMS plugin versions. Which version are you using? @cbielow...
Hmmm I see. And there is no other output for the node?
I mean "right-click -> View std output" or output on the log window.
But in this case there probably should be an error in the console or the KNIME logs. Can you increase the KNIME log level to DEBUG in the settings?
Sorry, but then I am out of ideas. Nothing looks wrong here. You tried to run it, right?
Unfortunately, maybe. You can ask in the KNIME forum if they can help with getting advanced logs or how to debug this. Some ideas: View -> KNIME.log. Hover over the...
Yes I guess it makes sense to add a level parameter there. Maybe even allow combination with the dissociation type for full flexibility.
Hey @daichengxin ! Regarding PSM clean: I think this is called in the "no rescoring" if-case, so I am a bit confused. It is only called for Sage IDs. Regarding...
Hi! I think it depends a bit. Our FeatureMap and ConsensusMap classes have a member unassignedPeptideIdentifications. This is a collection of identified spectra and their associated PSMs that could not...