Josiah Seaman
Josiah Seaman
Currently, TileLayout has a set of four containers that all need to be synchronized because they contain different pieces of the same puzzle. Refactor: Put all synchronized pieces into a...
Continuation of #62. Break very large chromosomes into multiple smaller "fake" contigs with 0 title_padding and a new "fake_start" attribute used to adjust the user displayed position. Contig names will...
It'd be nice if we could auto-generate this page based on Title and Thumbnail taken from Zoom stack. Job could take 5 days.
As a user, I want a box where I can type in Contig name, nucleotide index, or both. View should jump to the target. This can be done using nothing...
Users would like some way to search for, or jump to items of interest. It's worth considering and prioritizing features. Given that FluentDNA runs off a static file server, I'm...
Followup #33. When a chain representing a translocation is processed, the series of `AlignedSpans` are inserted into the existing composite alignment. These new alignedSpans do not appear to have `query_tail_size`...
Followup to #39 Gapped parallel could have two valid coordinates (gapped and ungapped index). This would be a nice feature, but a user can work around it by clipping out...
 
All of my testing has been over wifi, where chrome has no issue connecting to `Open a browser at http://127.0.0.1:8000` `fluentdna.py --runserver` However, when I was using an ethernet connection...
I'm creating this issue here in the hopes of building developer documentation that will be helpful to others that want to add some small feature to FluentDNA. Follow [Developer Installation...