HistoPrep

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Hi there! I was trying to open a histology WSI in .tif and bumped into the following error: File ~/.local/lib/python3.11/site-packages/histoprep/_backend.py:235 in __init__ self.__reader = openslide.OpenSlide(path) AttributeError: module 'openslide' has no...

ThaoCao

Is the slide resolution taken into account when extracting tiles ?

1

Hello, Thank you for this nice package ! I used `histoprep` on two slides with different resolutions. One was scanned at a mpp of 0.25, the other one with a...

CharlieCheckpt

Hi, I'm using HistoPrep for the preprocessing of some WSIs. Anyway, I would like to understand if there is some way to produce output patches with the correct size that...

FrancescaMiccolis

Hello, thank you for the great package. I am trying to process images with 30 channels (CycIF) in tiff format. I am running the examples provided in the readme, and...

maiskovich