jonathanperrie

getCounts segfault

5

I am running getCounts over ~10k files that occupy 4 GB of space. My peakset has 218595 peaks. The segfault happens even when I have access to 2x/4x the memory...

conda package conflict

1

Hello, I have cloned the repo and am running: `conda env create -f environment.yml` But I get this error:  Not sure what to do besides install things one at...

pooling pwmatrices together

3

With the exception of added redundancies and computational time for motif_ix, is there anything wrong with doing this? ``` library(BSgenome.Hsapiens.UCSC.hg18) library(chromVARmotifs) library(TFBSTools) data("homer_pwms") data("encode_pwms") data("human_pwms_v2") motifs