jon4thin

I am getting this message: `[faidx] Zero length sequence:` what does this mean? should I worry? examples: ``` [faidx] Zero length sequence: 17:82435845-82435845 [faidx] Zero length sequence: 17:82805891-82805891 [faidx] Zero...

Remove the `*` ALT Allele Reporting From a g.vcf Before (or After) Genotyping

1

I have a large scale dataset of WXS .g.vcfs , I do not have the original FASTA files. I would like to genotype these .g.vcfs into vcfs. These vcfs will...