Joachim Wolff
Joachim Wolff
Would it be an option for you to try the latest HiCExplorer version 3.7 or if the 3.6 version is important to you; try to use Python version 3.7 or...
I see. I think there is a major issue in your software environment, that happens sometimes. Let's try to clean it: - Delete all the conda environments with HiCExplorer installed...
`i wasn't able to use python 3.8 as it's not installed on the server then i did it with python 3.6. maybe it's related to that?` You can specify in...
Haven't we fixed this and can use also > 1.77 of Biopython @LeilyR @lldelisle ? Or was there maybe some dependency somewhere... I will check these days if I find...
Hi Giulio, I used so far the x86 version via Rosetta2 on my M1. This worked quite well, but I need to check which Python version it is using. I...
That looks to me that the conda dependency resolver is having once more troubles. Can you try mamba to install HiCExplorer? That’s an alternative conda installation and dependency resolver tool....
Just install „conda install mamba“ and use it like conda e.g. „mamba create -n hicexplorer hicexplorer -c conda-forge -c bioconda“ and activate the environment. -- Joachim Wolff M.Sc. Computer Science...
Conda-forge?
Ok, so I tested a bit on my M1 Mac. I think the problem is the selection of the native osx-arm64 packages. I am using the osx-64 (aka x86) packages...
Hi, I think we can add this feature for release 2.3. Best, Joachim