Joachim Wolff

Results 98 comments of Joachim Wolff

You can try either mamba instead of conda, or delete your non-working environment and set it up new with the requirements.txt file as explained above.

I published today a maintenance update version 3.7.3 which should fix this issue.

Please provide test cases and make sure it works with current python and numpy. Thanks!

Please update to the latest release. Thank you. On Mo, Dez 11 2023 at 02:05:38 -0800, Eric Bonnet ***@***.***> wrote: > Hi everyone, > > I'm trying to use the...

Hi, I am not sure what you want to do. The mentioned branch `aggregateGenome` does not exist: https://github.com/deeptools/HiCExplorer/branches/all Can you maybe explain from where you have that branch name and...

Hi, you can directly use any cool file with HiCExplorer without any change to h5. Best, Joachim

No, HiCExplorer supports cool and h5 for all its tools.

I published today a maintenance update version 3.7.3 which should fix this issue. However, please consider there might be issues with the ARM64 version. If 3.7.3. does not work, please...

Hi, we only support hic to cool /mcool, but not the other way round. Imho there is no library for this. Maybe you can ask the developers of hic format...

Yes, version 2.2.1.1 is outdated, the current version is 3.7.3 and is available via conda.