photon

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Hi Jan, I can't reload the network that I exported from generic network export. 

LLinda88

Error - Future Warning

1

Hello Jan, While following the tutorial on another computer, I encountered another error message when I run PHOTON. Also, when "Reconstruct signaling networks using ANAT" is unchecked, I get the...

K-Boum

Error message for network analysis

13

Hi! I keep getting an error during **step 2** in **Create the PPI network from the edge table and prepare it for data annotation**. I have the matrix of the...

bstankavich

We are following the tutorial but are held up at one section where we are receiving an error when assigning the “from matrix” “source and target.” We have attached a...

dasaraslab

PHOTON suitable for latest Perseus version

2

changes applied in order to make PHOTON suitable for the latest Perseus version (1.6.15.0)

danielaferretti1992

Photon - Value cannot be null

1

Hi Jan, I'm trying to use the photon modification with the interactions tutorial data. I have setup my python path and it appears in the executable box as green. I...

LauraEKane1

AttributeError: 'NoneType' object has no attribute 'text'

3

Dear Jan, Recently I have tried to get Photon up and running within Perseus and I started with the tutorial dataset that was posted here as well. The tutorial is...

DonnaOliviaD

Error when using Python

2

Hi Jan, I keep getting an error message after launching photon. I believe it is because there is a white space in the output path? Would you know how to...

IsalineMs

Perseus-PHOTON exsample data

2

Hi, I'm just starting to learn to using the PHOTON. I download the phosphoSTY_rudolph.txt and load it into Perseus and follow the Data preparation wokflow.  what is the data...

wanghao1991217

Hey, I’m trying to do network analysis in Perseus (PHOTON), but I’ve run into a bunch of errors that are beyond my expertise.? How can I deal with this error...

Rawan-Alnafisah