Jean-Christophe Lachance

icon indicating a website link https://www.linkedin.com/in/jean-christophe-lachance-b2555465/ icon indicating an email [email protected]

icon company Université de Sherbrooke icon location Sherbrooke icon location Bioinformatics PhD from Université de Sherbrooke. 3 years as a Visiting Graduate student at UCSD. Former Senior computational biologist at Ginkgo Bioworks.

Results 5 comments of Jean-Christophe Lachance

feature request: Zoom in and out with mouse scroll while holding the ctrl key

Inkscape 0.92.3 on Ubuntu 16.04, holding ctrl and scrolling the mouse center button allows to zoom in and out. Holding the mouse center button allows to drag around the image.

Expand applicability of Step1 to a broader range of identifiers

Yes, BOFdat is implemented for BiGG identifiers. The SEED identifiers in your model will therefore not be recognized. It was previously suggested to add a conversion feature so that other...

Error when trying to update BOF step 1 (1.8)

Christian did raise some interesting concerns: 1- Compatibility with Python3 has to be reviewed for most of the code 2- What do we want to do with the Update module...

error when trying to update biomass

Hi Christian, Are you still struggling with this issue? Thank you, JC

Solver issue in Step3

BOFdat Step3 requires using the Gurobi solver. This is necessary because of the high number of optimization performed by the genetic algorithm. You can check if the solver is accessible...