Jack Humphrey

icon company Mount Sinai School of Medicine icon location New York City icon location RNA, Genomics. member of @RajLabMSSM

Results 2 issues of Jack Humphrey

leafcutter_cluster_regtools and "?" stranded regtools junc files

This has been noted by at least one user in a private email to me. Using regtools on the suggested parameters for unstranded libraries ( -s=0), regtools occasionally reports junctions...

clustering

prepare_results needs cleaning up

TO DO: * write more tests to catch non-standard chromosomes * update data.table() and dplyr() to modern syntax to avoid weird messages. * write out summary tables at the same...