Ivan Aksamentov

Results 131 issues of Ivan Aksamentov

Prototype. A little broken. ![localhost_3000_(1920x1080) (4)](https://user-images.githubusercontent.com/9403403/172981234-672d6c19-aa77-4536-9c42-58846ce97978.png)

A prototype which aims to improve user experience around tooltips. When clicked, on the aa mutation, these tooltips: ![01](https://user-images.githubusercontent.com/9403403/157650546-0fe07df0-eeca-4596-90fc-2eed1c94c7a3.png) will now stick, so that information can be copied. The sticky...

We may save some screen real-estate by removing common prefixes in sequence names (and thus reducing width required by "Sequence width" column, and increasing width of sequence views). Consider for...

t:feat
good first issue
help wanted

We are looking to extend and improve our translations. We are using `i18next` and `react-i18next` modules in the app. The extraction of English strings is performed with `yarn i18n`. The...

t:feat
good first issue
help wanted

If a sequence fails to align, we might reverse complement it and try again. If alignment succeeds then we have yet another informative result. We might issue a warning, to...

t:feat
good first issue
help wanted

If and when the support for multiple visuses is added #213 we might also add an automatic detection of the virus type from sequences. This would conveniently fill the virus...

t:feat
help wanted
prio:high

We can never be sure whether sequences with long contiguous missing fragments are what user intends to analyze or whether it is a sequencing issue that needs to be reported....

t:feat
good first issue
help wanted

- Untranslated gene warnings are manifested in `nextclade.error.csv`, but not in main `nextclade.tsv` file. - `nextclade.tsv` file contains `errors` column, where alignment errors are manifested. - Nextclade currently does not...

t:feat

Ths docs build produces a lot of warnings When running ``` make docker-docs ``` here is a relevant part of the output: ``` checking consistency... /home/user/src/docs/README.md: WARNING: document isn't included...

t:bug
good first issue
help wanted

We might want to give users a hint that Nextclade requires a lot of memory in case there are many sequences. We can simply take fasta files size and upon...

t:feat
good first issue
help wanted