Ivan Aksamentov

@ryhisner I cannot help with bringing the column by default sadly, but here is how to download the trees and how to modify any JSON file: You can download the...

@ryhisner Hi Ryan, No, the "Clade" column is currently hardcoded into Nextclade software and is not configurable at this time. It is a built-in column that is a result of...

@ryhisner Yes, as a hardware workaround, a wider screen would allow for more space for sequences. For Nextclade we recommend at least a FullHD screen with 1920x1080 resolution, but the...

On this screenshot you can see how Nextclade looks on my 4K screen with 3840x2160 resolution (it's not ultrawide, just a usual 16:9 with 4K resolution) without scaling - around...

One nice way is to use [exception chaining](https://docs.python.org/3/tutorial/errors.html#exception-chaining). ```python try: some_code() except ConcreteException as e: raise FinalError(f"There was a concrete error and here is some recommendations: ...") from e ```...

I was hoping that ``` ENABLE_FORTRAN=1 ./build.sh ``` will do just that. But was surprised that it doesn't. I don't know the internal workings of osxcross, but this could potentially...

@corneliusroemer what truncation strategy would you like? I think Richard wanted to remove these names from tooltips entirely. This is one possible strategy :) Do you find them useful? (perhaps...

The default number of threads is now 3 (https://github.com/nextstrain/nextclade/pull/1021). It is deduced by the thorough empirical study, I promise ;) As usual, it can always be changed in settings if...

The messages are improved in https://github.com/nextstrain/nextclade/pull/1099. Our current example sequences for SC2 produce no warnings (clean output), so the Nextclade newbies should hopefully not be confused anymore.

@ammaraziz True. Nobody really used it anyways. I'll close this issue.