visium-clustergrammer2
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ismms-himc
Spatial Transcriptomics Dashboard
We will try to switch the location based plotting to ScatterGL which uses WebGL to dynamically visualize lots of scatterplot data points. * allow pan/zoom * allow lasso selection *...
https://portal.brain-map.org/atlases-and-data/rnaseq#Previous_Data_Files
Such as hmap function in R seriation package.
Make the following changes: * switch to WebGL * zoom/pan * selection via lasso
I need to add this example to the clustergrammer2-notebooks repo which has the latest version of all examples.
I'm sometimes seeing this error ``` IOPub data rate exceeded. The notebook server will temporarily stop sending output to the client in order to avoid crashing it. To change this...
Currently we are loading data from a CSV and we have to load the entire CSV into memory. Since this example is running on mybinder, which has limited memory ~1GB...