Irene López Santiago
Irene López Santiago
Hi, from an analysis of FAERS data, we have obtained a list of 1,770 MedDRA to MONDO mappings that we believe have a very high level of confidence: [meddra-mondo-xref-0995-1.json.zip](https://github.com/monarch-initiative/mondo/files/6585882/meddra-mondo-xref-0995-1.json.zip) This...
**Describe the bug** Pronto installation via Bioconda is out of date. **Observed behaviour** `pronto-0.12.2` is downloaded when pulling the package from Bioconda, however the dependency seems up to date on...
**What is this request referring to?** biallelic inactivation **What is the name you would like SO to give the term?** biallelic_inactivation **What is the definition that you would like for...
Hi! Lupus nephritis ([EFO_0005761](http://www.ebi.ac.uk/efo/EFO_0005761)) is defined as _glomerulonephritis always in the context of systemic lupus erythematosus_ ([EFO_0002690](http://www.ebi.ac.uk/efo/EFO_0002690)). This dependency is not captured in the ontology, since LP is not defined...
We have identified a potential lack of cross references between HPO and EFO terms that share a common label or synonym. For example, `Crohn's disease` [HP:0100280](https://www.ebi.ac.uk/ols/ontologies/hp/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FHP_0100280) is not referencing in...
Hi, from an analysis of FAERS data, we have obtained a list of approximately 10,000 MedDRA to EFO mappings that we believe have a very high level of confidence: [meddra-mappings-0995-1.json.zip](https://github.com/EBISPOT/efo/files/6450406/meddra-mappings-0995-1.json.zip)...
Hello, we have identified 8 cross-references between EFO and HP, MONDO IDs that are missing: | Xref ID | Xref label | EFO ID | EFO label | |---------------|----------------------------|-------------|---------------------------------| |...
At Open Targets we are importing ToxCast data, a new data source to annotate evidence on target safety. The terms that this source uses to describe the safety liabilities are...
This PR includes new logic to load documentation from Gitbook when the user wants to scrape every path of the docs. The current dataloader was not picking those routes that...
### What happened? `add_liftover` fails when provided a local chain file on Dataproc. The error says the file does not exist, even though it does. ## To reproduce This is...