Ivan Petrushin issues

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                                            Ivan Petrushin

DRAM-setup.py prepare_databases --skip_uniref produces error

I run `DRAM-setup.py prepare_databases --skip_uniref --output_dir DRAM_data`, trying to skip UNIRef DB step, but it fails twice. Maybe it's related to previous CONFIG file (envs/dram/lib/python3.10/site-packages/mag_annotator/CONFIG)? ```/home/ipetrushin/miniconda3/envs/dram/lib/python3.10/site-packages/mag_annotator/database_handler.py:51: UserWarning: Database does not...

NetworkX 2.3 not supported

Dear support! Since NetworkX 2.3 requires Python 3.5+ (https://networkx.github.io/documentation/stable/install.html) && Ragout uses Python 2.7 it's impossible to run Ragout (or install via conda) with NetworkX 2.3 installed. I have to...