fastq-files topic
kingfisher-download
Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.
fqtools
An efficient FASTQ manipulation suite
Spring
FASTQ compression
kseqpp
Fast FASTA/Q parser and writer (C++ re-implementation of kseq library)
colord
A versatile compressor of third generation sequencing reads.
fastq_utils
Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
faster
A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust
fasten
:construction_worker: Fasten toolkit, for streaming operations on fastq files
FASTX.jl
Parse and process FASTA and FASTQ formatted files of biological sequences.