Mark Keller

Results 215 comments of Mark Keller

I think the "Export data to static files" page is out of date. Seurat objects were previously converted to JSON format, but are now [converted to Zarr](https://github.com/vitessce/vitessceR/blob/main/R/data_to_zarr.R#L14), as Zarr is...

Related to #55

Fixed by #63

This is because the rstudio viewer pane is using an old version of JavaScript. The promise.allsettled API is supported in every major web browser https://developer.mozilla.org/en-US/docs/Web/JavaScript/Reference/Global_Objects/Promise/allSettled#browser_compatibility I will try adding a...

https://github.com/Bioconductor/Contributions/issues/2516

I just merged a pull request that upgrades the JavaScript package version used in the R package. Would you be able to check if the current implementation on the main...

Are you intending to use the current directory by supplying an empty string for `directoryPath = ""`? If so, can you try `directoryPath = "."`?

It seems like it could be an issue with the OME-TIFF organization or metadata (or with Vitessce being limited in the OME-TIFF files that can be loaded). Can you check...

Possibly related to https://github.com/jupyter/nbconvert/issues/1900

That is a schema version, which does not (at least currently) align with any package version