ClinCNV
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imgag
Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
[ClinCNV-1.18.3.patch](https://github.com/imgag/ClinCNV/files/12675433/ClinCNV-1.18.3.patch) Patch file submitted - reported by and end user of ours as a correction from the developer.
Hi! Would it be possible to make this tool available via bioconda for easier installation and automatic containerization via biocontainers? Cheers, Rike
we have to fix this issue: -[] If --noPlot is given, no plots should be generated. -[] ClinCNV should run without write permissions in the installation folder (otherwise you cannot...
ClinCnv throws no error if a BAF file is not readable. Please throw an error in case any file that is given via the command line cannot be opened.
- [ ] links on main page to real documentation - [ ] use GitHub issue tracker instead of email - [x] add license file to repository via GitHub -...
- [x] remove parameter '--folderWithScript' - [x] refactor code to split germline from somatic analysis (put it into the `germline` folder) - [x] rename script to something else than `firstStep.R`,...
Hello, when I run somatic CNV, I got this error: [1] "We are reading BAF files. It may take time - especially if you have a lot of SNV positions....
