Hongzhong Lu @Shanghai Jiao Tong University

@brj1 Thanks for your help! When i run the code, it still has errors. Do you know the reason? Error in MRCA(p, "I", "L") : unused argument ("L") In addition:...

The current issue is that the map format from SysBioChalmers/Yeast-maps should be updated to be visualised using caffeine .

Hi @BenjaSanchez I am not able to transform the format. Niko has done some work as the part of Yeast8 project but we did not get the completed result from...

Maybe firstly store such information in a tsv file firstly? @feiranl @edkerk

After we have the curated datasets. we can put it under this folder https://github.com/SysBioChalmers/yeast-GEM/tree/main/data/databases?

> generic yeast-GEM, also ready for other applications Seems there no direct applications of this information in yeast-GEM?

Hi Ed, what is detailed annotation, only the Uniprot ID per gene?

I see. It looks great.

@feiranl I can help to take care of it as previously i collect the rxn annotation from Rhea. I think it is easy to add the annotation information from Rhea...

This is interesting to enlarge the model applications! It is nice to see a model in development which could be updated and used using python and Matlab.